https://mjs-708.r-universe.devRecent package updates in mjs-708R-universehttps://github.com/mjs-708.pnghttps://mjs-708.r-universe.devThu, 15 Oct 2026 17:37:04 GMTmattyjsmith123@gmail.com (Matthew J. Smith)Reproducible post-acquisition processing of targeted LC-MS/MS lipidomics and metabolomics results exported from Waters TargetLynx or from Skyline, or supplied as a plain sample-by-analyte matrix. Reads the quantitative result tables, integrates them with sample and feature metadata, and applies configurable signal filtering (SNR, LOD or LOQ), blank filtering, batch correction, normalisation, internal-standard and volume adjustment of vendor-reported concentrations, and missing-value imputation. Each step is an exported function acting on a struct DatasetExperiment; a complete workflow can additionally be driven from a single YAML configuration via runMRManalyzeR(), which also renders self-contained HTML data-quality and statistical reports. Chromatographic peak detection, peak integration and calibration-curve fitting from raw mass-spectrometry data are outside its scope.https://github.com/r-universe/biocstaging/actions/runs/38802403704Thu, 15 Oct 2026 17:37:04 GMTMRManalyzeR0.99.6failurehttps://biocstaging.r-universe.devhttps://github.com/BiocStaging/MRManalyzeRmattyjsmith123@gmail.com (Matthew J. Smith)Implements tools for processing and quantifying targeted DESI-MRM mass spectrometry imaging (MSI) datasets, extending the Cardinal package. Includes signal-to-noise filtering against background pixels, tissue/background separation, per-feature ion images, quantile heatmaps, quantification against on-slide or on-tissue calibration standards, and batch export of per-feature text images for external viewers.https://github.com/r-universe/bioc/actions/runs/38802985245Thu, 15 Oct 2026 17:12:57 GMTquantMSImageR0.99.10successhttps://bioc.r-universe.devhttps://github.com/bioc/quantMSImageRquantMSImageR.RmdquantMSImageR.htmlIntroduction to quantMSImageR2026-07-20 14:02:252026-10-15 17:12:57quantification.Rmdquantification.htmlQuantification with calibration standards2026-07-20 16:40:262026-08-20 16:00:06